Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPIS-EKQIDTSIITSTHPRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYPILTWISSPDNSYNGPF----MSWYFANWPNLPSGFGPLN-------SDNTVTYTGSVVS-QVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISI-NNVTEMAPTS--PIKTN-- |
| 2CBA Chain:? ((3-260)) | ----------------------------------HHWGYGKHNGPE----HWHKDFPIAKGERQSPVDIDTHTAKYDPSLKP-----LSVSYDQATSLRILNNGH-------AFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYA----------AELHLVHWNTK-------YGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVS--SEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CBA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18437 for 1860 contacts (-9.9/contact) +
2D Compatibility (PS) -25678 + (NN) -10549 + (LL) 3812
1D Compatibility (HY) 1200 + (ID) 1500
Total energy: -51152.0 ( -27.50 by residue)
QMean score : 0.114
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