Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITYKKLLDELKKEIGPIAKIFLNKAMESLGYDDVDDSNYKEILSVLKMNKELREYVEIVEERLEKEG-
1R4G Chain:A ((516-568))
----KPTMHSLRLVI------------ESSPLSRAEKAAYVKSLSKCKTDQEVKAVMELVEEDIESLTN
General information:
TITO was launched using:
RESULT:
Template:
1R4G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5157 for 274 contacts (-18.8/contact) +
2D Compatibility (PS) -5766 + (NN) -1921 + (LL) 1504
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -14890.0 ( -54.34 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_1R4G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R4G-query.scw
PDB file :
Tito_Scwrl_1R4G.pdb
: