Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSCGTSTAHSLPCMFSTFDRTDYD-----EIKAEHQDNLLDIVQRAGVEVTWL-ENDSGCKGV--------CGKVPNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNK---NDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDL-ESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 3LXQ Chain:A ((84-370)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRKN-LVILLQESLGAQFVGSLGGL-PLTPNLDELMQEGWQFTQMYATGTRSVRGIEAVTTGFPPSPSRAVVKLSKSQTGFFTIADLLKEQGYHTQFIYGGEANFDNMKTFFFGNGFDQI--VEEKNYTNPGFVGSWGVSDEDLYNKADEEFERLSKGDKPFFSLVFTSSNHSPYE---YPEGKIEQYDS-------------EHMTRNNAVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDARVFGAN---------LVPVKHFHIPALIIG-KDIQP--R---------KDDRIANNIDMPPTLLSLIGVD-AKTPMIGRDLTKP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135146 for 2281 contacts (-59.2/contact) +
2D Compatibility (PS) -29005 + (NN) -9953 + (LL) 22764
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -162490.0 ( -71.24 by residue)
QMean score : 0.178
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