Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHHHHHHLIPAEQLPPLKEEEVIEKIENDACIQKSLEKIRALSKLI-----YNNPEILEQDISHINANPKMGRELSERIINSPKSIGRLKGRKIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTIMREHKAKGRRLLQTVKMPS |
2PIH Chain:A ((34-109)) | ------------------------AQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKI-------DALQEELEEIPVI--------------QEFRDSQMEVNDLLQLVAHTI----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10318 for 362 contacts (28.5/contact) +
2D Compatibility (PS) -7676 + (NN) -1549 + (LL) 5176
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 3469.0 ( 9.58 by residue)
QMean score : 0.236
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