Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MARGLPTIASLARLCQKLNRLKPLEDSTMET--------------SLRRCLSTLDLTLLGVGGMVGSGLYVLTGAVAKEVAGPAVL-------LSFGVAAVASLLAALCYAEFGARVPRTGSAY--------------LFTYVSMGELWAFLIG------WNVLLEYIIGGAAVARAWSGYLDSMFSHSIRNFTETHVGSWQVPL-LGHYPDFLAAGIILLASAFVSCGARVSSWLNHTFSAISLLVILFIVILGF----ILAQPHNWSADEG----GFAPFGFSGVMAGTASCFYAFVGFDVIAASSE--------EAQNPRRSVPLA-IAISLAIAAGAYILVSTVLTLMVPWHSLDPDSALADAFYQRGYRWAGFIVAAGSICAMNTVLLSLLFSLPRIVYAMAADGLFFQVFAHV-HPRTQVPVAGTLAFGLL-----------TAFLALLLDLESLVQF----LSLGTLLAYTFVATSIIVLRFQKSSPPSSPGPASPGPLTKQQSSFS-DHLQLVGTVHASVPEPGELKPA-----LRPYLGFLDGYS---PGAVVTW---------ALGVMLASAITIGCVLVFGNS--TLHLPH-----------WGYILLLLL-----------TSVMFLLSLLVLGAHQQQYREDLFQIPMVPLIPALSIVLNICLMLKLSYLTWV-------------RFSIWLLMGLAVYFGYGIRHSKENQRELPGLNSTHYVVFPRGSLEETVQAMQPP-----SQAPAQDPGHME------------------------------------------------- |
| 2YIC Chain:A ((7-868)) | KNARVIELIAAYRNRGHLMADIDPLRLDNTRFRSTLWDLDREFQRKKLRDILSVLRDAYCRHVGVE---YTHILEPEQQRWIQERVETKHDKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIV--GKPYSQIFSEFEDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRELEKHLATAVDKAMLQRIGDAHLALPEGFTVHPRVRPVLEKRREMAYEGRIDWAFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQGPDHTSGRIERFLQLWAEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPK-SMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKIYYELAARKAKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEILPDHFTGLKRISRRAMSAPSSGSSKVHAVEQQEILDTAFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -535851 for 4884 contacts (-109.7/contact) +
2D Compatibility (PS) -65874 + (NN) -24954 + (LL) -148
1D Compatibility (HY) -6800 + (ID) 5200
Total energy: -638827.0 ( -130.80 by residue)
QMean score : 0.231
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