Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSALNWKPFVYGGLASITAECGTFPI-----------------DLTKTRLQIQGQ----TNDAKFKEIRYRG----------------------MLHALVRIGREEG-----------------------------------LKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDETLPINVICGIL-----------------SGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNFMNIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALA--------SNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKLDL--- |
3IYM Chain:A ((39-434)) | ASASKAAAFAQGGSSDPVPMPGKYPVVFSTGAGEPTRDQEFALPVHKAFPLFGSVSDKYRRNPRYAEFRAHSEFTDGVFGTHLAVSSLLRLAQQLVHAHVNMGLPLGDFAPLASSDVRIPSALASVVNQFGEFSSPSIGTRFLLRDFEHAVSRVVFLADQLWTNGNSHHIFARSWLPMSNNDGNFKTIVASRLLEFISAGDLSILPTVLEDAVLSGEVPEAWEQVKDLLGDAPGVGQVDRRDRFDFLFKSYADVGQFTTAFTTQAASDVLTELGLPWNSPSAGHLNWQ-YSTKQRFTFLADTWAKLSAAYSQFFELSSGLATRQSATGSHAQMVDLTSVEGVTVLKAALALSAPEFSLAACFPPSCIFVGGLTRRVVVTTSLSVSQRATEFCQMDWR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28587 for 1921 contacts (-14.9/contact) +
2D Compatibility (PS) -28907 + (NN) 3193 + (LL) -172
1D Compatibility (HY) 400 + (ID) 1400
Total energy: -55473.0 ( -28.88 by residue)
QMean score : 0.029
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