Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METVPPAVDLVLGASACC---------LACVFTNPLEVVKTRLQLQGELQARGTYPRPYHGFIASVAAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCYSLACQAGLTQQPGGTVVAGAVAGALGAFVGSPAYLIKTQLQAQTVAAVAVGHQHNHQTVLGALETIWRQQGLLGLWQGVGGAVPRVMVGSAAQLATFASAKAWVQKQQWLPEDSWLVALAGGMISSIAVVVVMTPFDVVSTRLYNQPVDTAGRGQLYGGLTDCMVKIWRQEGPLALYKGLGPAYLRLGPHTILSMLFWDELRKLAGRAQHKGT |
1DK4 Chain:A ((1-252)) | MKWDEIGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLKSLNVNIVSEELGVIDNSSEWTVVIDPIDG--SFNFINGIPFFAFCFGVFKN-NEPYYGLTYEFLTKSFYEAYKGKGAYLNGRKIKVKD----------FNPNNIVISYYPSKKIDLEKLRNKVKR--VRIFGAFGLEMCYVAK---------------------GTLDAVFDVRPKVRAVDIASSYIICKEAG--------ALITDENGDELKFDLNATDRLNIIVANSKEMLDIILDLL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148387 for 2156 contacts (-68.8/contact) +
2D Compatibility (PS) -24922 + (NN) 6092 + (LL) 5708
1D Compatibility (HY) -1600 + (ID) 1650
Total energy: -164759.0 ( -76.42 by residue)
QMean score : 0.160
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