Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHEGSASRQKALSLVSCFAGG--VFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMG-FFLVLVMEQITLAYKEQSGPSPLEETRALLGTVNGGPQHWHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI |
3CEQ Chain:B ((211-479)) | LVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD------------QNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALEIYATRL----------GPDDPNVAKTKNNLASCYLKQ------GKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRR--------DSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106540 for 2033 contacts (-52.4/contact) +
2D Compatibility (PS) -29195 + (NN) -22853 + (LL) 5228
1D Compatibility (HY) 11600 + (ID) 1450
Total energy: -143210.0 ( -70.44 by residue)
QMean score : 0.234
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