Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MPGCPCPGCGMAGPRLLFLTALALELLERAGGSQPALRSRGTATACRLDNKESESWGALLSGERLDTWICSLLGSLM-----VGLSGVFPLLVIPLEMGTMLRSEAGAWRLKQLLSFAL--------------GGLLGNVFLHLLPEA------WAYTCSASPGGEGQSLQQQQQLGLWVIAGILTFLALEKM--FLDSKEEGTSQAPNKDPTAAAAALNGGHCLAQPAAEPGLGAVVRSIK-------------------VSGYLNLLANTIDNFTHGLAVAASFLVSKKIGLLTTMAILLHEIPHEVGDFAILLRAGFDRWSAAKLQLSTALGGLLGAG----------------FAICTQSPKGVVGCSPAAEETAAWVLPFTS--------GGFLYIALVNVLPDLLEEEDPWRSL-------------------QQLLLLCAGIVVMVLFSLFVD--------------------------------------------- |
| 4IMP Chain:A ((31-550)) | SDPAAGWFWQAVARQDLKSVSDALDLDADAPLSATLPALSVWHRQERERVLADGWRYRVDWVRVAPQPVRRTRETWLLVVPPGGIEEALVERLTDALNTRGISTLRLDVPPAATSGELATELRAAADGDPVKAILSLTALDERPHPECKDVPSGIALLLNLVKALGEADLRIPLWTITRGAVKAGPADRLLRPMQAQAWGLGRVAALEHPERWGGLIDLPDS----LDGDVLTRLGEALTNGLAEDQLAIRQS-GVLARRLVPAPANQPAGRKWRPRGSALITGGLGAVGAQVARWLAEIGAERIVLTSRRGNQAAGAAELEAELRALGAQVSIVACDVTDRAEMSALLAEFDVTAVFHAAGVGRLLPLAETDQNGLAEICAAKVRGAQVLDELCDSTDLDAFVLFSSGAGVWGGGGQGAYGAANAFLDTLAEQRRARGLPATSISWGSWAGGGMADGAAGEHLRRRGIRPMPAASAILALQEVLDQDETCVSIADVDWDRFVPTFAATRATRLFDEVPAARKAM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193598 for 2748 contacts (-70.5/contact) +
2D Compatibility (PS) -38366 + (NN) -8954 + (LL) 148
1D Compatibility (HY) 1600 + (ID) 3550
Total energy: -242720.0 ( -88.33 by residue)
QMean score : 0.138
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