Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDS-KEFYFTLDNGKTMFPSNSQAWGGEK-FENGQRAF--VIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
| 3K6O Chain:A ((14-206)) | ----------------------------------TVTIAMATVEKQPQYDAPYLVLDNGEKLWVVQ--HIVPYRDLKAGERIFGNYSFLEAGES--GFAYNIRLNDYTLVPVQKIIGLNPD--NMDSIGNMKVQIKDMWPS--DDYLNVRFMLN-F-PSPQKPILNLVVNEM--------IPWTKDGYAHLELRYNNNGSQ-GRLVPGMVSFKLDDYSPENSELKGIKVLVNPVDGEEKTYIFSYP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57603 for 1332 contacts (-43.2/contact) +
2D Compatibility (PS) -20501 + (NN) -7591 + (LL) 3696
1D Compatibility (HY) -14800 + (ID) 2750
Total energy: -99549.0 ( -74.74 by residue)
QMean score : 0.358
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