Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVDSLGHTFHGDHAYVFYQKPVGARKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGTESVTISPAFDEEVWFNRFRVGIWPDYFEGVQFKRDKETLDQYFRQMTPTIGTTDFEVYSDAYAALFDKI--GPGVFITHSQGGPVGWNTLLKTR-NIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
| 1IMJ Chain:A ((31-208)) | --------------------------------------------------------------ARFSVLLLHGIRFSSETWQNL-----GTLHRLAQAGYRAVAIDLPGLGHSKEAAAP------------------------------------------------APIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD-----------------------KINAANYA-SVKTPALIVYGDQD----------P--MGQTSFEH----LKQ-LPNHRVLIMK-----GAGHPCYLD-KPEEWHTGLLDFLQG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99258 for 1468 contacts (-67.6/contact) +
2D Compatibility (PS) -19847 + (NN) -15706 + (LL) 11324
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -130387.0 ( -88.82 by residue)
QMean score : 0.230
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