Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGDFYIPLSMSSQCQVDGGLDYGGW-DESVYTISPY--STGNTWKHYYSVGGNNLMLAIKNAEEA--DPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKYPKFDSQESVLNGVLSLLDEALQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSK---ATAIGTLLQAGGMVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIP--CYFEPGA-------DG--VYRGLGNREPAVTDDKDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREA-----------CAFYG----------VAEADIDTYVTGLPELTALTQEKALYEIHMQQWIDLM--D-RPFEEFVQWRR-----SGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKE-----SPKIWEKLWFDL |
| 3FDH Chain:A ((18-496)) | -------------------------------------SVASRFILADVITSTAFSNASGDI--NTYASSYIEYEVGVDNQLYYAEVRENEPSSSSTFNNSWNGIYS-SLKNARIIIDQCGEGGRDHGNDVTRGMAEVMAAYNCALIADFFGDAPCSQAA----MTPKMDTQQEIYTQIISYLDDAIANLQKEDLADVTEQDFLYAGDADKWLKFAYGLKARYTMRLINRSSNKSADYEKVLDYV--SKSFTSADDQAAFDIYDSN-NINPFYGFY----NSRAGFGASTSLGTKLLAYNDPRANRAFFTPIVDKKRSQVAANDPSLVPAPNGSPDQST---S-KYG-ISAFVYAKTAPTLLMSYHELMFLKAEALCRLNR------DAEDALKEAVVAGLLNAENSISIAIKELGSGLNTNSSEVITETSAGKYFDDVVK--AKYAANPLQETMIQKYLAMWGASGEATETYNDFRRMKGLNENFITLTNP-----NN--SSKFPLRYPYGNSDTAANP-EVKAAYGNGDYVYSEPVWWAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78503 for 3713 contacts (-21.1/contact) +
2D Compatibility (PS) -43926 + (NN) -17890 + (LL) 5152
1D Compatibility (HY) -13600 + (ID) 4750
Total energy: -153517.0 ( -41.35 by residue)
QMean score : 0.274
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