Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGAAEWDVHDGVFTVNKKKGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQ---------GMYEVQVLDCYNNP---TYVNGQTGSIYKQSIPLA-NAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTTILGTTE---------WIGFP--QVK-KHGAGPIILQ-SHGDPSEPISFRNIWIREL |
| 3S5Q Chain:A ((15-214)) | ---------------------------------------------------------------LYFQGYRPLF-DKDLSNADY---DSSVWTFKNGILTATA-DQSIWTKVQYENFILDLEFKTDV--------NTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNRMIITAKG------------QQIDIELNGKHIVS-ANLADWTSGTTNPDGTEIPEWLPIPYANMPTKGYIGLQGKHGE--SNIWFRNIQLKQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70004 for 1323 contacts (-52.9/contact) +
2D Compatibility (PS) -19133 + (NN) -5315 + (LL) 4064
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -99088.0 ( -74.90 by residue)
QMean score : 0.321
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