Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGAN---------------ALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKK
1P5Q Chain:A ((146-273))
------------QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC--
General information:
TITO was launched using:
RESULT:
Template:
1P5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13820 for 863 contacts (16.0/contact) +
2D Compatibility (PS) -12622 + (NN) -5941 + (LL) 772
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -10771.0 ( -12.48 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1P5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P5Q-query.scw
PDB file :
Tito_Scwrl_1P5Q.pdb
: