Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEKQIDTSIITSTHPRLIPHDLTIPQN-LETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYP-ILTWISSPDNSYNGPFMSWYFA--NWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINNVTEMAPTSPIKTN |
| 2D42 Chain:A ((2-249)) | ----AIINLLRELEIYGMQYANSHQYT--YGSS-YS------DDTNPIRIAGLDARIPDPIVTDPVNHIVLDRRIITNTTSNSLEGVFSFSNAYTSRTSSQTRDGVTAGTNITGKY----FANLFFEQVG-----LSGRIAFEGAVTNENKYTLDATQDFRDSQTIRVPPFHRATGVYTLEQGAFEKMTVLECVVSGNGIIRYYRTLPDNSYTEI---VQ--RVNIIDVLQANGTP-GFTISKEQNRAYFTGEGTISGQIGLQTFIDVVIEPLPGH------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61341 for 1799 contacts (-34.1/contact) +
2D Compatibility (PS) -26374 + (NN) -13480 + (LL) 3872
1D Compatibility (HY) 400 + (ID) 2000
Total energy: -98923.0 ( -54.99 by residue)
QMean score : 0.191
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