Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLEMAALLL-DIQPG-DEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDI--DDRSALINFLKEAEIMAVFHYIPLHGCPAGEHFGEFHGEDRYT--TKESERLLRLPLFYNLSPVNQRTVIATLLNYFS |
2FNU Chain:A ((3-369)) | EFAYSEPCLDKEDKKAVLEVLNSKQLT-QGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLESGYTPVFAGIKNDG-NIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFE-----GEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDN---PYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQL---FNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTF- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -275794 for 3157 contacts (-87.4/contact) +
2D Compatibility (PS) -39498 + (NN) -16582 + (LL) 380
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -351394.0 ( -111.31 by residue)
QMean score : 0.502
|
|
|