Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTFLIIIGLFLFIGNSFAQSYEELIEKSYDFVDKGDLVSAEESLKAAMRKEPANPLNYALLTNLGTIQRR----QGKLQEALISYTSALSGHTKNITILENRASLYTE----LGETEKALNDYNTLLIENPEHQEALYCRGLLYIQLQ----NYMWAEQDFDKILEVNEKSVRARLGHAILEKM----RGNYDESERIFNYLISEMPRDWILYEGRADLYFM----MGKNARAMADIEKVFTESEPTANLYVLRGKIKLA----QYEKERAALDFKKAESMGYNKEVIKELLKLTMNN--- |
| 1OUV Chain:A ((28-292)) | --------------------DPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE-----NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACD--LNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD--LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD--LNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE--LENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL--GAKGACDILKQLKIKVHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19596 for 2012 contacts (-9.7/contact) +
2D Compatibility (PS) -26406 + (NN) -16507 + (LL) 2136
1D Compatibility (HY) 400 + (ID) 1900
Total energy: -61873.0 ( -30.75 by residue)
QMean score : 0.335
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