Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGPVAGNYVHDFTANGTSSSFYTIAGNLSTSKGTATYNGKTLTQCLKMETATSISFT--APSAGKLTLV--FAEA---AA--TAKVDGNKV--T----ASNG-------IITVDLAQGAHTITKA---D--ACNLFYMEYAAHHHHHH
2W47 Chain:A ((38-130))
-------------------------------------------------VGGYIEWNVNAPSSGSYALIFRYANGTTANRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVANLNQGNNVIRATAIASDGGPNVDYLKVFS------
General information:
TITO was launched using:
RESULT:
Template:
2W47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26271 for 349 contacts (-75.3/contact) +
2D Compatibility (PS) -6955 + (NN) 2901 + (LL) 2136
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -33489.0 ( -95.96 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_2W47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W47-query.scw
PDB file :
Tito_Scwrl_2W47.pdb
: