Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRQPVSSSRILSIGYDPDNRMLEIQFREQGTYQYLGVPERAHQNFMSAVSKGRFFDGVIKGKFLCRKIG
1F3M Chain:A ((13-41))
--------EHTIHVGFDAVTG----EF--------TGMPEQ-WARLLQTS--------------------
General information:
TITO was launched using:
RESULT:
Template:
1F3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4517 for 114 contacts (-39.6/contact) +
2D Compatibility (PS) -3159 + (NN) -2919 + (LL) 2780
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -9715.0 ( -85.22 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_1F3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F3M-query.scw
PDB file :
Tito_Scwrl_1F3M.pdb
: