Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKV--TVANKTELGLIHIYSEF-PDYRWVKD--PIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKE------YKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEG-VAVPEWLPHTAGDQASVLLMALSDAQALEAKPE--IEKMMRSLAAGIMLMQVKDTSSPVNGAFL-SWQNL-------WHGYGNS-QAYALLVAGNRL-----GDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEI--SRDAVYLERAVDLSLWFFKN-NPAQAQMYYPVTGIAF-DGIDSA------TTVNKN----SGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 3K11 Chain:A ((40-415)) | ---------------------------FAYIDKETPARVVDKNTGKV-ITDYTAMGDEAQLERGAFRLASY---EWGVTYSALIAAAETTGDKRYTDYVQNRFRFLAEV---APHFKRVYEEKGKTDSQLLQILTPHALDD-----AGAVCTAMIKLRLKDE--SLPVDGLIQNYFDFIINKE-----YRLADGTFARNRPQRNTLW---LDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRMFIPEK----GLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGEGF----------WHQLLDCNDSYL-ETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAGKINEEGQ-V----EGTCVGTGMAFDPAFYYYRPVNVYAAHGYGP-----VLWAGAEMIRLLN---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125210 for 2811 contacts (-44.5/contact) +
2D Compatibility (PS) -35048 + (NN) -12871 + (LL) 6884
1D Compatibility (HY) 4400 + (ID) 1550
Total energy: -163395.0 ( -58.13 by residue)
QMean score : 0.334
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