Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | AMIPLFKVAVSPTALDRVAEVFASGYLGQGPRVAEFESALAARLGNPRVVSVHSGTSGLCLALRLL-DAPEER-DEVLSTPLTFEATNWAILADGRRITWVDVDPATLTMDLDDLERKISPATRAIIVVHWTGYPVDLDRLAGILDRAEREHGFRPAVIEDCAHAWGASYRGVPLGSHGNMCVFSFQAL-HLTCGDGGLLTLPGDELHERAMLRRFYGIDRTADRLRGAYDVAEWGLKWHMTDLNAAIGLANLETVDEQLRLHRENAAFYDKELTGVPGLELLQRSPDREGSFYVYDVKVD-----DRPAFHRKMEAAGIMAGLVSRRNDEHSCVA--HLRTSLPGLDSVYDRMVSLPVGWWLTEQDREHVVATIRSGW |
| 2FNU Chain:A ((2-368)) | KEFAYSEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEF-SADRNEIITTPISFVATANMLLESGYTPVFAGIKNDG-NIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKK----HSL--SFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFF---EGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227835 for 3126 contacts (-72.9/contact) +
2D Compatibility (PS) -39313 + (NN) -18431 + (LL) 708
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -306171.0 ( -97.94 by residue)
QMean score : 0.480
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