Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSSNGGAIKAVIYDCDGVMFDSFEANLAFYQRIMEMMGRPRLSRDNEEQMRILHTYANREVLAHFFP----------SPGDWEEAVRCAGAIDYRELVPLMIMEEGFREALDTLKG-RVGLGVCTNRSTS-MDMVLRLFSLDSYFSIVMTASRVTNPKPHPEPLLKVLEHFGIGPREALFVGDSEVDRLSAEAAGVPFVAYKAP---------LPAAYRMEHHREIIDLLG
2HSZ Chain:A ((19-242))
-----GMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS---ENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT-
General information:
TITO was launched using:
RESULT:
Template:
2HSZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151523 for 1707 contacts (-88.8/contact) +
2D Compatibility (PS) -22281 + (NN) -14316 + (LL) 260
1D Compatibility (HY) -13600 + (ID) 2250
Total energy: -203710.0 ( -119.34 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_2HSZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HSZ-query.scw
PDB file :
Tito_Scwrl_2HSZ.pdb
: