Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVH---------DFNHRTTSDMWLYRAYSGN---LYHNGEQ-------TLTLSSFTQGDFITCVLDMEARTISFGKNGE--EPKLAFED-VDAAELYPCVMFYSSNPGEKVKICDMQMR
3UV9 Chain:A ((305-494))
-LATNNISHAVIAEDKRQVSSR-AGTGVLGSQSITSGKHYWEVDVSK---KSAW-ILGVC-AGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHGFLIYKFSQCSFSKPVFPYLNPR--KCTVPMTLCS----
General information:
TITO was launched using:
RESULT:
Template:
3UV9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91549 for 976 contacts (-93.8/contact) +
2D Compatibility (PS) -16224 + (NN) -9248 + (LL) 512
1D Compatibility (HY) -8000 + (ID) 1250
Total energy: -125759.0 ( -128.85 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_3UV9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UV9-query.scw
PDB file :
Tito_Scwrl_3UV9.pdb
: