Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAATASAGAGGIDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIG-MTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFC--ASMISGLVTTAASMPVDIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSG |
| 1JRO Chain:A ((1-165)) | --------------------------------------------MEIAFLLNGETRRVRIEDPTQSLLELLRAE-GLTGTKEGCNEG----------DCGACTVMIRDA------AGSRAVNACLMMLPQIA-GKALRTIEGIA----------------APDGRLHPVQQAMIDHHGSQ----CGFCTPGFIVSMAAAHDRDRK----DYDDLLA--GNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTLPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104190 for 1301 contacts (-80.1/contact) +
2D Compatibility (PS) -16757 + (NN) 1734 + (LL) 4444
1D Compatibility (HY) 0 + (ID) 1450
Total energy: -116219.0 ( -89.33 by residue)
QMean score : 0.227
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