Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLSWLTVLGAGMVVLHFLQKLLFPYFWDDFWFVLKVVLIIIRLKKYEKRGELVTVLDKFLSHA-----KRQPRKPFIIYEG-----DIYTYQDVDKRSSRVAHVFL-NHSSLKKGDTVALLMSNEPDFVHVWFGLAKLGCVVAFLNTNIRSNSLLNCIRACGPRALVVGADLLGTVEEILPSLSE-NISVWGMKDSVPQGVISLKEKLSTSPDEPVPRSHHVVSLLKSTCLYIFTSGTTGLPKAAVISQLQ-VLRGSAVLWAFGCTAHDIVYITLPLYHSSAAILGISGCVELGATCVL--KKKFSASQFWSDCKKYDVTVFQYIGELCRYLCKQSKREGEKDHKVRLAI--GNGIRSDVWREFLDRFGNIKVCELYAATESSISFMNYTGRIGAIGRTNLFYKLLSTFDLIKYDFQKDEPMRNEQGWCIHVKKGEPGLL-ISRVN---AKNPFFGYAGPYKHTKDKLLCDVFKKGDVYLNTGDLIVQDQDNFLYFWDRTGDTFRWKGENVATTEVADVIGM-LDFIQEANVYGVAISGYEGRAGMASIILKPNT-----SLDLEKVYEQVVTFLPAYACPRFLRIQEKMEATGTFKLLKHQLVEDGFNPLKISEPLYFMDNLKKSYVLLTRELYDQIMLGEIKL |
| 3C5E Chain:A ((37-562)) | ----------------------------------------------------FNFASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGAC-GLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKS-CDGWLNFKKLLNEASTTHH----CVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSS-YKFPHLQNCVTVGESLLPETLENWRAQTGL-DIRESYGQTETGLTCMVSKTM---KIKPGYMGTAASCYDVQIIDDKG-----------NVLPPGTEG-DIGIRVKPIRPIGIFSGYVDNPDKTAANI-------RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHP-AVVETAVISSPDPV-RGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -349753 for 4272 contacts (-81.9/contact) +
2D Compatibility (PS) -53133 + (NN) -16756 + (LL) 10344
1D Compatibility (HY) -17200 + (ID) 4750
Total energy: -431248.0 ( -100.95 by residue)
QMean score : 0.411
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