Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAHSVFEGLALGLQEEG-EKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLVLGYTV--LAGMVFLKW |
| 3DKT Chain:A ((1-264)) | MEFLKRSFAP-------LTEKQWQEIDNRAREIFKTQLYGRKFVDVEGPYGWE----------YAAHPLGEVEVLSDENEVVKWGLRKSLPLIELRATFTLDLWELDNLERGKPNVDLSSLEETVRKVAEFEDEVIFRGC--------------EKSGVKGLLSFEERKIECGSTPKDLLEAIVRALSIFSKDGIEGPYTLVINTDRWINFLKEEAG------HYPLEKRVEECLRGGKIITTP---------------RIEDALVVSERGGDFKLILGQDLSIGYEDREKDAVRLFITETFTFQVVNPEALILLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192847 for 1904 contacts (-101.3/contact) +
2D Compatibility (PS) -27045 + (NN) 4591 + (LL) 3340
1D Compatibility (HY) -400 + (ID) 1950
Total energy: -214311.0 ( -112.56 by residue)
QMean score : 0.209
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