Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVT-MDDEENTEEKIGDDKINATYM--WISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
| 3K0Y Chain:A ((10-204)) | ----------------------------------DIWIAVATVVPEGNNVYYLRLDDGDKLWPAATNYP-NYQPKPNQRALVNFTILADS-----HYIKVNAIHNILTKSIAKNEGAA--NDSIYGTDPVSIYNNNMWIG--DGYLNIYFETLWGG--KTAHFINLIQPD------------AENDPYTLEFRHNAYDDPQYTIGAGRVAFNLSSLPDTKGETVDLVVNYWT-SEGKQAYKLKYN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51453 for 1265 contacts (-40.7/contact) +
2D Compatibility (PS) -19387 + (NN) -5071 + (LL) 3664
1D Compatibility (HY) -12400 + (ID) 2450
Total energy: -87097.0 ( -68.85 by residue)
QMean score : 0.318
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