Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKG--GAA-EWDVHDGVFTVNKK-------KGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQG------------MYEVQVLDCYNNPTY-----VNGQTGSIYKQSIPLA-NAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTTIL-------GTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL |
| 4JQT Chain:A ((213-430)) | ----------------------------------------------------------TISPREAKEGWALLWDGKTNNGWRGAKLNAFPEKGWKMEDGILKVMKSGGAESANGGDIVTTRKYKNFILTVDFKITE--------GANSGVKYFVNPDLNKGEGSAIGCEFQILDDDKHPDAKLGVKGNRKLGSLYDLIPAPEKKPFNK-KDFNTATIIVQD------------NHVEHWLNGVKLIEYTRNTDMWNALVAYSKYKNWPNFGNSAEGNILLQDHGD---EVWFKNVKIKEL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74681 for 1397 contacts (-53.5/contact) +
2D Compatibility (PS) -19169 + (NN) 321 + (LL) 4232
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -101547.0 ( -72.69 by residue)
QMean score : 0.296
|
|
|