Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MVDLKID-VSDDEEAEKIIREIREQWP---KATVTRTNGDIKLDAQTEK-EAEKMEKAVKKVKPNATIRKTGGSLEHHHHHH
1JWW Chain:A ((1-80))
VTEKAEFDIEGMTCAACANRIEKRLNKI-EGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQDSIEGR----
General information:
TITO was launched using:
RESULT:
Template:
1JWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3824 for 468 contacts (-8.2/contact) +
2D Compatibility (PS) -7945 + (NN) -3218 + (LL) 332
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -19155.0 ( -40.93 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1JWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JWW-query.scw
PDB file :
Tito_Scwrl_1JWW.pdb
: