Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLPDIVNMYFDADSCNDTDALSETFAPDAVVEDEG--------ARHQGVVAILRWWVAAKKAAS-YVAEPLESTVDGDKALVRAKVSGR-FPGSPVTLTY--SFTIKDGRIARLEIQ
3EBT Chain:A ((7-119))
----QTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMRLAPDEFIESGERIVVLGTRRVTAVNGRSATLKFVHVWRFENGRAVTFED-
General information:
TITO was launched using:
RESULT:
Template:
3EBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29974 for 616 contacts (-48.7/contact) +
2D Compatibility (PS) -10683 + (NN) -2976 + (LL) 288
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -45395.0 ( -73.69 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_3EBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EBT-query.scw
PDB file :
Tito_Scwrl_3EBT.pdb
: