Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYRPFGSTGVAVSALTLRLADNPRLRANDWRALVFTALENGVNSFQIDGDAPELLKGAGEAFAS--VERHLLFLTWRLRGDAKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSA-------SLPMAFESGLQDLQKGRALRGLGVASRGDIDP-GLLAN--DLVTAVSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQA-LREVADKAPPKPSFWQRRTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP |
| 4F40 Chain:A ((10-274)) | KAMVTL-SNGVKMPQFGLGVWQSP--AGEVTENAVKWALCAGYRHIDTAAIYK-NEESVGAGLRASGVPREDVFITTKLWN--TEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLG--KLLS----------------N-----PILSAIGAKYNKTAAQVILRWNIQKNL--ITIPKSVHRERIEENADIFDFELGAEDVMSIDALN------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123076 for 2158 contacts (-57.0/contact) +
2D Compatibility (PS) -26546 + (NN) -6571 + (LL) 3236
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -163057.0 ( -75.56 by residue)
QMean score : 0.315
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