Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLL---AARGDEIVN-FPQVRSC-GT-STAHSLPCMFSTF-DRTD--Y-DEIKAEHQDNLLDIVQRA-GVEVTWLENDSGCKGVCGK--VP-------NTDVTSLNLPE-YCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDD-LESVVHYVSDHGESLG-EN---GMYL--HAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
2W5Q Chain:A ((31-337)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIIKIHLESFQTFLINKKVNGKEVTPFLNKLSSGK-EQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDY--KTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFT---LDEKDATIEKSN--------TGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFT--DLNRTGFWIKIPG--K-S-G--------GINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96134 for 2277 contacts (-42.2/contact) +
2D Compatibility (PS) -29658 + (NN) -11536 + (LL) 21828
1D Compatibility (HY) -10000 + (ID) 2450
Total energy: -127950.0 ( -56.19 by residue)
QMean score : 0.167
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