Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASWSHPQFEKGADDDDKSEPPVSMLMQVAGAVETSKGGEKWAPVTRNKFLFVGTQVRTGADGGGKLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPEAASGDLVAGLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMGAQYGYTLVIDGTSHAVPATSGEMVRFRVPSLTPGAHSFGVTVTEGGQAVGQTEKGGTIVWLSATEDKALVDGVARVKAASTGDEFALGNYLDSKGVTVAAMDAYRKHFASHK-------DDNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
1TJC Chain:A ((145-223)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8179 for 518 contacts (15.8/contact) +
2D Compatibility (PS) -7704 + (NN) -4770 + (LL) 13784
1D Compatibility (HY) -400 + (ID) 400
Total energy: 8689.0 ( 16.77 by residue)
QMean score : 0.091
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