Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV |
| 3M20 Chain:A ((8-50)) | ---------------------------------------------PKLDVGKKREFVERLTSVAAEIYGMDRSA--------ITILIHEPPAENVG---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9504 for 192 contacts (-49.5/contact) +
2D Compatibility (PS) -5008 + (NN) -6726 + (LL) 9320
1D Compatibility (HY) 0 + (ID) 200
Total energy: -12118.0 ( -63.11 by residue)
QMean score : 0.122
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