Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------MKKYLTIVIALVTLQSAFSQVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAETLM-----EPVVSMVRYYEQFGEMPKCIVVGVYEPKQEDVTVVEEVGRPINESARFFEFVSAELVPYIQ--GKYPIADLKGVIASEEAGFLANYYML--AEKKPTFNMIVSLNPVALPRMGEEFSHALAAGVPNRLFYYMATADVENKVVYDKAIQFERAMRSAPVHESVEYHFVD-FKGSSVNAAKLQGIAQA----LDMCF-----DIYKPIGGKEFKTQMETLETGIYEYLENKYNTIYKQLGVKKVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYL---KTAMPNFFLAEYYEKIGDDKKAL-KTYQKAYTEPNIDFITGDLINERITHLQATKRKSKHTKVIEPIEPTEEV-----APAQEEQNPTDESNQN-- |
| 1QE3 Chain:A ((2-484)) | THQIVTTQYGKVKGTTENGVHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDA--TAYGPICPQPSLPRQS---EDCLYVNVFAPDTPSQ--NLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGE----VIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRT-MTKEQAASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFFTPDSDVHSQETLDAALEYLLGKPLAEKAADLYPRSLESQIHMMTDLLFWRPA--VAYASAQSHYAPVWMYRFDWHPEKPPYNKAFH----ALELPFVFGNLDGLITDE--VKQLSHTIQSAWITFAKTGNPSTEAVNWPAYHEETRETVILDSEITIENDPESEKRQKLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69741 for 3108 contacts (-22.4/contact) +
2D Compatibility (PS) -40456 + (NN) 1415 + (LL) 1660
1D Compatibility (HY) -3600 + (ID) 2600
Total energy: -113322.0 ( -36.46 by residue)
QMean score : 0.269
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