Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MSALNWKPFVYGGLASITAECGTFPIDLTKTRLQIQGQTNDAKFKEIRYRGMLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDETLPINVICGILSGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNFMNIYQQEGTRGLWKGVSLTAQR---AAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKLDL |
| 4QFR Chain:C ((28-322)) | YTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHK--IETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVI-DPESGN-TLYILTHKRILKF-LKLFITSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKT------------------YNNLDVSVTKALQHRVLKCYLHETLEAIINRLVEAEVHRLVVVDEHD-----------VVKGIVSLSDILQALV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69220 for 1914 contacts (-36.2/contact) +
2D Compatibility (PS) -26821 + (NN) 1667 + (LL) 2512
1D Compatibility (HY) -9600 + (ID) 2250
Total energy: -103712.0 ( -54.19 by residue)
QMean score : 0.161
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