Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYS-GTFDCFRK--------TLF-------REGITGLYRG----MAAPIIGVTPMFAV---CFFGF-GLGKKLQQKH-------PEDVLSYPQL--FAAGMLSGVFTTGIMTPGERIKCLLQ------IQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKN--IFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPN---GFRDVL--RELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL-- |
| 4PEI Chain:A ((7-355)) | QIQHIAIVGSVHGKYREMYRQLSEYEKST-----GKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSN------LSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGS-PINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDT--FDIQFTSRRFYIEKIYNELNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120937 for 2045 contacts (-59.1/contact) +
2D Compatibility (PS) -29254 + (NN) -1492 + (LL) 608
1D Compatibility (HY) -14000 + (ID) 2650
Total energy: -167725.0 ( -82.02 by residue)
QMean score : ?
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