Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MQMDNRLPPKK-------VPGF-------------------CSFRYGLSFLVHCCNVIITAQRACLNLTMVVMVNSTDPHGLPNTSTKKLLDNIKNPMYNWSPDIQGIILSS---------------TSYGVIIIQVP-------------------------VGYFSGIYSTKKMIGFALCLSSV-----------------LSLLIPPAAGIGVAWVVVCRAVQGAAQGIVATA-------------QFEIYVKWAPPLERGRLTSMSTSGFLLGPFIVLLVTGVICESLGWPMVFYIFGACGC--AVCL-LWFVLF--YDDPKDHPCISISEKEYITSSLVQQVSSSRQSLPIKAILKSLP---------VWAISTGSFTFFWSHNIMTLYTPMFINSMLHVNIKENGFLSSLPYLFAWICGNLA-GQLSDFFLTRNILSVIAVRKLFTAAGFLLPAIFGVCLP--YLSSTFYSIVIFLI-------LAGATGSFCLGGVFINGLDIAPRYFGFIK-ACSTLTGMIGGLIASTLT---GLILKQDPESAWFKTFI-LMAAINVTGLIFYLIVATAEIQDWAKEKQHTRL--------- |
| 2QYU Chain:A ((8-627)) | ATSSPSSPADWAKKLTDAVLRQKAGETLTAADRDFSNADFRNITFSKILPPSFMERDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNS----DMNEVFLQYSITTQQQPSFIDTTL----KNTLIRHKANLSGVILNEPDNSSPPSVSGGGNFIRLGDIWLQMPLLWTENAVDGFLNHEHNNGKSILMTIDSLPDKYSQEKVQAMEDLVKSLRGGRLTEACIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFAHQCQTYNDVPLPAPDTYYQQRILPVLLDSFDRNS-AAMTTHSGLFNQVILHCMTGVDCTDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSPDWT--TRAADNFLLLS--SQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHDF--PVFLAAFNQQATQRRFGELIDIILSTEEHGELNQQFLAATNQKHSTVKLIDDASVSRLATIFDPLLPEGKLSPAHYQHILSAYHLTDATPQKQAETLFCLSTAFARYS--SSAIFGTEHDSPPALRGYAEALMQKAWELSPAIFPSSEQFTEWSDRFHGLHGAFTCTS------VVADSMQRHARKYFPSVLSSILPLAWA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -346988 for 3212 contacts (-108.0/contact) +
2D Compatibility (PS) -44915 + (NN) 901 + (LL) 2740
1D Compatibility (HY) -16800 + (ID) 4750
Total energy: -409812.0 ( -127.59 by residue)
QMean score : 0.177
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