Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDIISTMFNRKFMEELFKPQELYSKKALRTVYERLAHASIMKLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHL--DTIKGFIRDS--PTILQQVDETLRQLTEIYGGLSAGEFQLIRQTLLIFFQDLHIRVSMFLKDKVQNNNGRFVLPVSGPVPWG-------TEVPGLIRMFNNKGEEVKRIEFKHGGNYVPAPKEGSFELYGDRVLKLGTNMYSVNQPVETHVSGSSKNLASWTQESIAPNPLAKEEL-NFLARLMGGMEIKKPSGPEPGFRLNLFTTDEEEEQAALTRPEELSYEVINIQATQDQQRSEE--LARI-MGEFEITEQPR--LSTSKGDDLLAMMDEL |
| 4IC4 Chain:A ((26-397)) | KSVT---------------------RRNDIPEAAASPPSLLSFLRKNVGKDLSSIAMP-------VTSNEPIS--ILQLISETFEYAPLLTKATQRPDPITFVSAFAISFLSIY-RDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEHLDWECSYTVTPSQKFWGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKS-HILFDKAGMFSGRSEGFKVSIIPPP--SSNRKKETLAGKWTQSLANETTHETIWEVGDLVSNPKKKYGFTKFTANLNEITEIEKGNLPPTDSRLRPDIRAYEEGNVDKAEEWKLKLEQLQRERRNKGQDVEPKYFEKVSKNEWKYITGPKSYWERRKKHDWSDISQLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4704 for 2819 contacts (-1.7/contact) +
2D Compatibility (PS) -37151 + (NN) -3786 + (LL) 3284
1D Compatibility (HY) -8400 + (ID) 2950
Total energy: -53707.0 ( -19.05 by residue)
QMean score : 0.167
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