Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MPAPRAREQPRVPGERQPLL--PRGARGPRRWRRAAGAAVLLVEMLERAAFFGVTANLVLYLNSTNFNWTGE-QATRAALVF---LGASYLLAPVGGWLADVYLGRYRAVALSLLL-YLAASGLL-------PATAFPDGRSSFCGEMPASPLGPACPSAGCPRS----------------SPSPYCAPVLYAGLL----LLGLAASSVRSNLTSFGADQVMDLGRDATRRFFNWFY--------WSINLGAVLSLLVVAFIQ--------QNISFLLGYSIPVGCVGLA------FFIFLFATPV-------------FITKPPMGSQVSSMLK-LALQNCCPQLWQRHSARDRQCARVLADERSPQPGA------------SPQEDIAN--FQVLVKILPVMVTLVPYWMVYF-----QMQSTYVLQGLH--LHIPNIFPANPANISVALRAQ----GSSYTIPEA--WL-----------------------------------------------------------------------LLANVVVVLILVPLKDRLIDPLLLRCKLLPSA-LQKMALGM------------FFGFTSVIVAGVLEMERLHYIHHNETVSQQIGEVL-----------YNAAPLSIWWQIPQYLLIGISEIFASIPGLEFA----YSEAPRSMQGAIMGIFFCLS-------------------GVGSLLGS----SLVALLSLPGGWLHCPKDFGNINNCRMDLYFFLLA-GIQAVTALLFVWI-------------AGRYERASQGPASHSR-FSRDRG------------------------------------ |
| 4PKF Chain:A ((8-864)) | KVLEYKGKKLNFTPEDPAEETIPADELHEHLQKPSTARTKRLKERCRWKHASAGEFIEKSVTAGI--ERMRYLTEAHKASEGKPEAIRRALGLANVLNKSTLVLQEDEFIVGYHAEDPNMFPLYPELSHMAVQDYLRSDYSPQPADEAAAINEYWKPHSLQSKCQPYFDPADLGRMYQVSSMEAPSFASGYNSIVPPYETVLEDGLLARIKLAEKHIAEAQADMSTFPWNGTKGLDNIAKIDNWKAMVIACKAVISWARRQGRLCKIVAENFETDPKRQAELLEIADICQRIPAEPCKGLKDAMQAKFFTFLICHAIERYASGYAQKEDTLLWPYYKASVVDKKFQPMSHMDAVELVEMERLKISEHGAGKSRAYREIFPGSNDLFILTVGGTNAKGEDACNDMTDAILEAAKRIRTAEPSIVFRYSKKNREKTLRWVFECIRDGLGYPSIKHDEIGTEQMKEYAKFSLNGNGATDEEAHNWVNVLCMSPGIHGRRKTQKTRSEGGGSIFPAKLLEISLNDGYDWSYADMQLGPKTGDLSSLKSFEDVWEAFRKQYQYAINLCISTKDVSRYFEQRFLQMPFVSAIDDGCMELGMDACALSEQPNGWHNPITTIVAANSLVAIKKLVFEEKKYTLEQLSQALKANWEGFEEMRVDFKRAPKWGNDDDYADGIITRFYEEIIGGEMRKITNYSGGPVMPTGQAVGLYMEVGSRTGPTPDGRFGGEAADDGGISPYMGTDKKGPTAVLRSVSKVQ---KNQKGNLLNQRLSVPIMRSKHGFEIWNSYIKTWHDLNIDHVQFNVVSTDEMRAAQREPEKHHDLIVRVSGYSARFVDIPTYGQNTIIARQEQDFSASDLEFLNVEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -344188 for 4225 contacts (-81.5/contact) +
2D Compatibility (PS) -59240 + (NN) -13608 + (LL) 472
1D Compatibility (HY) -9600 + (ID) 5600
Total energy: -431764.0 ( -102.19 by residue)
QMean score : 0.205
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