Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MGPWGEPELLVWRP----EAVASEPPVPVGLE-----VKLGALVLLLVL--TLLCSLVPICVLRRPGANHEGSA-----------SRQKALS---LVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSGPSPLEETRALLGTVNGGPQHWHDGP--GVPQASGAPATPSALRACVLVFSLALHSVFE---------------------------GLAVGLQRDRARAMELCLALLLHKGILAVSL-----SLRLLQSHLRAQVVAGC----------------------GILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI------------------------------------- |
4MT0 Chain:A ((1-445)) | CTMIPQYEQPKVEVAETFQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYNAVRIAVQGRRDFRRRPAPAEALIESAKADYAHAARSREQARNALATLINRPIPEDLPAGLPLDKQFFVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLADLYKALGGGLKRDTQT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129792 for 1950 contacts (-66.6/contact) +
2D Compatibility (PS) -34341 + (NN) -14168 + (LL) 0
1D Compatibility (HY) 7600 + (ID) 2950
Total energy: -173651.0 ( -89.05 by residue)
QMean score : 0.167
|
|
|