Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDPNSCVDNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIG---TSLVSLVVPVSIGMFVNHKWPQKAKII---LKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSL--GFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK |
| 4N7X Chain:A ((42-278)) | ----------------------------------------LLMLIMFAMGVTLRLDDFKRVLSRPAPVAAATFLHYLIMPLTAWILAMLFRMPPDLSAGMVLVGSVASGTASNVMIYLAKGDVALSVTISAVSTLVGVFATPLL----TRLYVDA---TISVDVVGMLKSILQIVVIPITAGLVIHHTFTKTVKRIEPYLPAMSMV-CILAIISAVVAG---SQSHIASVGFVVIIAVILHNGIGLLSGYWGGKLFGFDESTCRTLAIAVGMQNSGLAATLGKIYFSPLAALPGALFSVWHNLSGSLLAGYWSGKP---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N7X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223813 for 1896 contacts (-118.0/contact) +
2D Compatibility (PS) -23114 + (NN) -3821 + (LL) 6780
1D Compatibility (HY) -24400 + (ID) 3750
Total energy: -272118.0 ( -143.52 by residue)
QMean score : 0.246
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