Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDLKIDVSDDEEAEKIIREIREQWPKATVTRTNGDIKLDAQTEKEAEKMEKAVKKV-------KPNATI---------RKTGGSLEHHHHHH
1QYS Chain:A ((18-94))
--DYTYTVTTESELQKVLNELMDYIKKQGAKRVR--ISITARTKKEAEKFAAILIKVFAELGYNDINVTFDGDTVTVEGQL------------
General information:
TITO was launched using:
RESULT:
Template:
1QYS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23865 for 297 contacts (80.4/contact) +
2D Compatibility (PS) -6473 + (NN) -3597 + (LL) 396
1D Compatibility (HY) -800 + (ID) 300
Total energy: 13091.0 ( 44.08 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1QYS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QYS-query.scw
PDB file :
Tito_Scwrl_1QYS.pdb
: