Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVSGPGDLLRGMVARRSEETVVA--LRNAQLVT----FTAMDIGHQH-ALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVF----DGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWFPDQPLTRDFDEDAATHREPVLQRRTQKA |
| 4K5S Chain:A ((69-222)) | ---------------------------------------------------------------------------------------------LRGLLDRFLEGTQVAKGLPFAGIFTQGLDFGLVDTRHPYTALVP------QSRTEALLAEHAREAGAEIRRGHEVTGLRQDAEAVEVTVAGPSGPYRVRARYAVGCDGGRSTVRRLAGIGFPGTEATVRALIGYVTTPEREVPRRWERTPDGILVLAFPP--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1352 for 624 contacts (-2.2/contact) +
2D Compatibility (PS) -14236 + (NN) 5918 + (LL) 9784
1D Compatibility (HY) -3600 + (ID) 2200
Total energy: -5686.0 ( -9.11 by residue)
QMean score : -0.012
|
|
|