Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNINKAKVASVESDYSSIKSAALSYYSDTNK-IPVTPDG-QTGLNVLETYMESLPDKADIGGEYKLIKVGNKLVLQ---IGKDGEGVTLTEAQSAKLLSDIGKDKIYTGVTGDNFGEQLKDTTKIDNKALYIVLIDNTVMDSTK |
| 4KBW Chain:D ((76-170)) | -----AKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVV-----AGPDAP--------IQVGNALPLRFIPVGTVVHAVELEPKKGAKLARAAGTSAQIQGREGD------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13420 for 477 contacts (28.1/contact) +
2D Compatibility (PS) -9496 + (NN) -1258 + (LL) 2904
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: 1020.0 ( 2.14 by residue)
QMean score : 0.027
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