Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAFSRFTPLIQSLPASVPFVGPEALERQHGRKIAARIGANESGFGPAPSVLL----AIRQAAGDTWKYADPENHDLKQALARHL------GTSPANIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYH---VAGHGGRLVTVPY-ADDREDLEGLLAAVGRENAPLVYLANPDNPMG---SWWPAERVVAFAQALPETTLLVLDEAYCETAPRDALPPIESLIDK--PNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNHFGMSRIGVAAAIAALADQ-DYLKEVTLKIANSRQRIGRIAADSGLAPLPSATNFVAV-DCGKDASYARAIVDRLMSDHGIFIRMPGVA-PLNRCIRISTAPDAEMDLLAAALPEVIRSLAAT |
| 3CQ4 Chain:A ((31-356)) | ------------------------------------RLNTNENPYPPSEALVADLVATVDKIATEL-----RDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF---GGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGI-----VIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVE-KLSVERVRVAARLEELGYAVVPSESNFVFFGDFSDQHAAWQAFLDR-----GVLIRDVGIAGHLRTTIGVPEENDAFLD---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137518 for 2438 contacts (-56.4/contact) +
2D Compatibility (PS) -33025 + (NN) -21606 + (LL) 6252
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -211647.0 ( -86.81 by residue)
QMean score : 0.377
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