Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLL---VEMLRDANVGEREKVARRLAMLNEMP----------GVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIA------QRRGVSEVV---------ADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR |
| 3B5W Chain:A ((408-571)) | ----------------------REYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSAL---DTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDL--LEHRGV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 665269 for 8128 contacts (81.8/contact) +
2D Compatibility (PS) -12199 + (NN) 9056 + (LL) 20820
1D Compatibility (HY) 1200 + (ID) 800
Total energy: 683346.0 ( 84.07 by residue)
QMean score : 0.000
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