Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHMVAMQSTIPSLTREEIA-----DRMQHNPLVQAYQQEVMHWCKIVYGNSDVLKEKMQEVLQKPSEGEDLSRQVAENPTSVHKLAGRNLCGLKTNARRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEARRYGQESEQRA
1CW0 Chain:A ((66-155))
FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQI--DTQGIHLLA-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5103 for 483 contacts (-10.6/contact) +
2D Compatibility (PS) -8786 + (NN) 2340 + (LL) 4392
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -11057.0 ( -22.89 by residue)
QMean score : 0.013
(partial model without unconserved sides chains):
PDB file :
Tito_1CW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CW0-query.scw
PDB file :
Tito_Scwrl_1CW0.pdb
: