Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHHHHHHFISPQKIVPLSYNEFIRKVVSDHSIQEQEKEIRRLSQIVFGNQNQLANQLSQIHENPSFTKIISNTLTNSPESFAKLAGS-KTFGIKNSKRKQAEKNISKLVEAIHKYADAVENSMGNIIKNHNAEQKRLAQSVELPSD- |
2K48 Chain:A ((1-107)) | MHHHHHHGKPIPNPLLGLDSTE-----------------------------------------NLYFQGIDPFTMSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26658 for 528 contacts (50.5/contact) +
2D Compatibility (PS) -10945 + (NN) 794 + (LL) 3704
1D Compatibility (HY) 400 + (ID) 1150
Total energy: 19461.0 ( 36.86 by residue)
QMean score : 0.169
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