Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV--SRWPVHDFNHRT----TSDMWLYRAYSGNLYHNGEQTLTLS-------SFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSSNPGEKVKICDMQMR
2IHS Chain:A ((70-192))
-------------------------------VGLTKGLHIWEIYWPTRQRGTHAV-VGVCTADAPLHSVGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKN-FLVPDKFLVALDMDEGTLSFIVDQQYLGIAFRGLRGKKLYPIV-------------------
General information:
TITO was launched using:
RESULT:
Template:
2IHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53139 for 681 contacts (-78.0/contact) +
2D Compatibility (PS) -11662 + (NN) -4736 + (LL) 1920
1D Compatibility (HY) -8000 + (ID) 1550
Total energy: -77167.0 ( -113.31 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_2IHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IHS-query.scw
PDB file :
Tito_Scwrl_2IHS.pdb
: